A survey on chromosomes 1 and 5 for QTL controlling body weight in Markhoz goats

Document Type : Research Paper

Authors

Abstract

Body weight is one of the most important traits which has quantitative traits inheritance. QTL mapping not only provides useful information regarding the status and number of genes controlling quantitative traits. It can also help the breeders in marker-assisted selection. This study aimed to identify QTL affecting body weight on chromosomes 1 and 5 in Markhoz goats using microsatellite markers. The studied population consisted of 248 animals from 8 half sib families genotyped for eleven microsatellites on chromosomes 1 and 5. Phenotypic data including body weight at birth, 4 months, 6 months, 9 months and 12 months of age that were corrected for fixed effects including year of birth, sex and type of birth. QTL analysis was performed based on regression analysis. In this research significant QTL was not found on chromosome 1 while one chromosomal regions associated with weight at 4 and 6 months of age was found on chromosome 5. The location of the detected QTL was 2 to 8 cM near the OarFCB005 marker. Maybe this region of chromosome 5 contain genes that affect growth trait. Considering that the locations of this QTL was near the location of OarFCB005 marker, if further investigation were performed, this marker could be used in marker-assisted selection.

Keywords


Alinaghizadeh H, Mohammad Abadi MR, Zakizadeh S (2010). Exon 2 of BMP15 gene polymorphismin Jabal Barez Red Goat. Iranian Journal of Agricultural Biotechnology 2: 69-80 (in Farsi).  
Cano EM, Marrube G, Roldan DL, Bidinost F, Abad M, Allain D, Vaiman D, Taddeo H, Poli MA (2007). QTL affecting fleece traits in Angora goats. Small Ruminant Research 71: 158–164.
Cano EM, Debenedetti S, Abad M, Allain D, Taddeo HR, Poli MA (2009). Chromosomal segments underlying quantitative trait loci for mohair production in Angora goats. Animal Genetic Resources Information 45: 107–112.
Knott SA, Elsen JM, Haley CS (1996). Methods for multiple-marker mapping of quantitative trait loci in half sib populations. Theoretical Applied Genetic 93: 71–80.
Luis A, Salazar M, Hirata H, Cavalli AS, Machado MO, Rosario DC (1998). Optimized procedure for DNA isolation from fresh and cryopreserved clotted human blood useful in clinical molecular testing. Clinical Chemistry 44: 1748-1750.
Mohammad Abadi MR, Askari N, Baghizadeh A, Esmailizadeh AK (2009). A directed search around caprine candidate loci provided evidence for microsatellites linkage to growth and cashmere yield in Rayini goats. Small Ruminant Research 81: 146-151.
Mousavizadeh A, Mohammad Abadi MR, Torabi A, Nassiry MR, Ghiasi H, Esmailizadeh AK (2009). Genetic polymorphism at the growth hormone locus in Iranian Talli goats by polymerase chain reaction –Single strand conformation polymorphism (PCR-SSCP). Iranian Journal of Biotechnology 7: 51-53.
Rashidi A, Sheikhahmadi M, Rostamzadeh J, Shrestha JNB (2008). Genetic and phenotypic parameter estimates of body weight at different ages and yearling fleece weight in Markhoz goats. Asian-Australasian Journal of Animal Science 21: 1395-1403.
Rashidi A, Bishop SC, Matika O (2011). Genetic parameter estimates for pre-weaning performance and reproduction traits in Markhoz goats. Small Ruminant Research 100: 100-106.
Seaton G, Hernandez J, Grunchec JA, White I, Allen J, Koning DJ, Wei W, Berry D, Haley C, Knott S (2006). GridQTL: a grid portal for QTL mapping of compute intensive datasets. Proc. of 8th Word Congress on Genetics Applied to Livestock Production. Aug. 13-18, 2006. Belo Horizonte, Brazil.
Visser C, Van Marle-Koster E, Bovenhuis H, Crooijmans RPMA (2011). QTL for mohair traits in South African Angora goats. Small Ruminant Research 100: 8–14.
Visser C, Van Marle-Koster E, Snyman MA, Bovenhuis H, Crooijmans RPMA (2013). Quantitative trait loci associated with pre-weaning growth in South African Angora goats. Small Ruminant Research 112: 15– 20.